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Fig. 6 | Virology Journal

Fig. 6

From: A full-length S1 gene sequencing of a novel emerged GI-19 and GI-23 lineages of Infectious bronchitis virus currently circulating in chicken flocks in upper Egypt reveals marked genetic diversity and recombination events

Fig. 6

Comparative analysis and characterization of the predicted tertiary structure revealed the specific mutations in the S1protein of the novel identified IBV strains (GI-23 and GI-19). Briefly, a three-dimensional structural analysis structure template was downloaded from the PDB database, and the HVRs regions of IBVs GI-23 and GI-19 isolates compared to referential and vaccinal strains; were predicted. The deep red color indicates the localization of specific mutations in the S1 protein of GI-23 and GI-19 isolates. The 3D structure was visualized by PyMOL software

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