Fig. 6
From: Virome diversity and potential sharing of wild mammals in a biodiversity hotspot, Yunnan, China
Phylogenetic of Hepeviridae, Flaviviridae and Astroviridae constructed by maximum likelihood method. Trees were generated with 1000 bootstrap replicates using the best-fit models (LG + G + I for RdRp protein). Red lines represent sequencing contigs from rodents, blue lines represent sequencing contigs from small mammals, and black lines represent reference sequences obtained from NCBI. Circles have been added before sequences displaying high similarity (with sequence identity ≥ 90%) to pathogenic reference sequences