Table 1 Percentage of the genome covered (> 30X) in the three independent replicates, concatenating two replicates (2X) and concatenating three replicates (3X) in the specimens that overcame the quality threshold when concatenating. The replicates which were randomly selected as references are shaded
Sample ID | Ct | 1X | 2X | 3X | ||
|---|---|---|---|---|---|---|
A | B | C | ||||
R-3 | 38.3 | 87.63 | 72.65 | 94.28 | 95.2 (AB) | 99.02 |
R-5 | 33 | 90.28 | 68.06 | 87.11 | 97.47 (AC) | 98.35 |
R-7 | 33.3 | 67.06 | 51.97 | 69.81 | 84.56 (BC) | 92.22 |
R-9 | 35 | 83.62 | 89.34 | 89.15 | 97.59 (BC) | 98.51 |
R-20 | 34 | 80.41 | 85.46 | 83.84 | 92.17 (BC) | 94.27 |
R-28 | 34 | 96.52 | 95.79 | 75.63 | 98.69 (BC) | 99.59 |
R-29 | 33 | 78.67 | 76.65 | 72.73 | 94.04 (AC) | 96.4 |